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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015940544.1_cds_XP_016484716.1_75704
CDS Infomation

[gene=LOC107805230] [db_xref=GeneID:107805230] [protein=probable thimet oligopeptidase isoform X4] [protein_id=XP_016484716.1] [location=join(1013..1178,1252..1373,2915..3078,3914..4004,11332..11412,25208..25285,25595..25687,26013..26093,26194..26356,26484..26604,26698..26767,26840..26947,32720..33073)] [gbkey=CDS]
Sequence

ATGTTAGCAGCTCTCTTTGTAAGTAGAAGTAGAGTTGAAAAAATGGGTAAGCAGCAGAAG
AGAGACAGAAGCAATCTCATTGCTTTGACGGGAGCCGCTGCTCTTCTCGCTATTGCTGTC
AACTTTGCTATCTCCGCCATCAACAACAAACATCGCAAGAAAAAAGAGATTCCAGGTTCA
AATGTTCGAGTCAATCTAACTGCTTCTCAAATTCTGAAATTAGCCGAAAGCATAATTAAG
AAATCGAAGCAAGTTCATGATGCTGTTGCATCAGTTCCACTTGACAAGGTTGCCTATGTA
AATGTGATATTGCCATTAGCAGAGTTAGAGGCACAGCAGTTCCCGTTGATACAGTCATGT
GTCTTTCCTAAATGGTTATCAGCTTTTGAGGATGTACGCAAAGCTAGTGCTGTAGCAGAT
AGAAAAATAGATGCTCACATTTCAATGTGCAGGAAGCGTGAGGACATATACAGAGTTGTC
AAAGCTTTAACAGTAACAGGGGATGGATTGAGTACTGATGCTAAAAACTTTACCCACTTC
CTGAGCTTAGAAAAATCTAAAGATGGTAAAAGAAAAATCATTTTGAAGAGCCATCAGATT
TTACCAGTGCTAGAGCTTTGCAAGGTGGGATCAACCAGAAGAGCTGTTGCTATTTCCTAT
GGGCGCAGATGTGAGGCCAATGTTACTATCCTTGAAAAGCTGATTCAGTTGCGGCACAAG
CTTGCTAGATTGCTTGGATTTGCAAATTATGCTGACTATGCCACTGATGTTAGAATGGCA
AAGTCTTCCTCTAAGGTGTTTGAGTTCTTGGAGAGTCTCTCTGCCAGCTTAAATGATTTA
GCCTACAGGGAACTTTCGATGGTTAAAGCATTAAAGAAGAAAGAGGAAGGCGAATGTCCT
TTCGGCATGGAGGATCTCCCATACTATGTCAAAAGAGTCAAAGATCAACAATTCCGTATG
AATTTTGGAGTAATTAAACAGTACTTCCCTATCAATTTGGTTTTGTCCGGCATCTTCAAA
ATCTGCCAAGACTTATTTGGCTTAGATTTCAAGGAAGTTGAAGGTGCTGAGGTTTGGCAT
CCAGATGTGCAGCTATTTTCAGCTTCAGATCTTAGTTCTAAAGGACTTGTTGGTTATTTT
TACCTAGATCTATACTCCAGAGTCGGTAAATATGCGCATACCTGTGTCATAGCTCTTCAG
AATGGTTTACTAAATAATGGTTCAAGACAGATTCCTGTGGCGCTACTTGTTTCTCAATTT
GAAAAGAAAGTTGATGGTCACCCTGGGTTATTGCAATTCCCTGAAGTGGTGAATCTTTTC
CATGAATTTGGTCATGTGACAGTTAAGGAGGCTTTGAATCACCCTGGGTGGTATAATGCA
ATGCTTGAGGAGATCCATGCGCTAGATGAAAATCACACTTGGGATTTGGTGGACTTACCA
AAGGGGAAGAAGGCAGTGGGATGCAAATGTATCTTTGCATTCAAGGTAAATCCAGATAGT
TCTGTGGCTAGGCTTAAAGCTAGACTGGTGGTTAAAGGGTATGCTCAAACTAATGGAATG
GATTATTCAGACACCTTTTCTTCGGTGTCCAAGCTCACTTCTATTCGATTGTTTGTTTCT
TTAGTTGCCTCCGAGCATTGGCCTTTACATCAGTTGGATATTAAAAATGCATTTCTTCAT
GGTGATCTCTAA

Peptide Sequence

PEP ID

XP_016484716.1
PEP Infomation

PREDICTED: probable thimet oligopeptidase isoform X4 [Nicotiana tabacum]
Sequence

MLAALFVSRSRVEKMGKQQKRDRSNLIALTGAAALLAIAVNFAISAINNKHRKKKEIPGS
NVRVNLTASQILKLAESIIKKSKQVHDAVASVPLDKVAYVNVILPLAELEAQQFPLIQSC
VFPKWLSAFEDVRKASAVADRKIDAHISMCRKREDIYRVVKALTVTGDGLSTDAKNFTHF
LSLEKSKDGKRKIILKSHQILPVLELCKVGSTRRAVAISYGRRCEANVTILEKLIQLRHK
LARLLGFANYADYATDVRMAKSSSKVFEFLESLSASLNDLAYRELSMVKALKKKEEGECP
FGMEDLPYYVKRVKDQQFRMNFGVIKQYFPINLVLSGIFKICQDLFGLDFKEVEGAEVWH
PDVQLFSASDLSSKGLVGYFYLDLYSRVGKYAHTCVIALQNGLLNNGSRQIPVALLVSQF
EKKVDGHPGLLQFPEVVNLFHEFGHVTVKEALNHPGWYNAMLEEIHALDENHTWDLVDLP
KGKKAVGCKCIFAFKVNPDSSVARLKARLVVKGYAQTNGMDYSDTFSSVSKLTSIRLFVS
LVASEHWPLHQLDIKNAFLHGDL

Transcript Sequence

Gene sequence data has not been registered.